Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
3WFV Chain:A ((9-85))
----------------------------------SGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQTRVL---------------GGGGR--------------------------WMQWDKEISNYTNTVYRLLEESQNQQERNEKDLLAL-
General information:
TITO was launched using:
RESULT:
Template:
3WFV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6612 for 377 contacts (17.5/contact) +
2D Compatibility (PS) -8457 + (NN) -1963 + (LL) 5412
1D Compatibility (HY) -9200 + (ID) 3200
Total energy: -10796.0 ( -28.64 by residue)
QMean score : 0.206
(partial model without unconserved sides chains):
PDB file :
Tito_3WFV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WFV-query.scw
PDB file :
Tito_Scwrl_3WFV.pdb
: