Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MGPNAVELTT-----DQAWCLADVLGA--------GSYPWVLAITPPYSDHSQRSAFLAAQSAELTRMGV----------------VNSAGAVDPRVAQWITTV-------CRATQWLDLRFVSGPGDLLRGMVARRSEETVVAL------------RNAQLVTFTAMDIGH---QHALVPVLTA------GLSGRKPARFD------DFALPAAAGARA-----DEQIRNGAPLAEVLEFLGVPPSARPLVESVFDGRRTYVEI-----------VAGEHRDGHRVTTEVGVSIIDTPH-------------GRILVHPTKAF-DGEWISTFTPGS--------ADAIAMAVERLTASLPSGSW----FPDQPLTRDFDE--------DAATHREPVLQRRTQKA------------------ |
| 4EPQ Chain:A ((34-472)) | DYQFPLPQKNSELWIIQKKTLQDLSSGKQKLDSFQSLESILEILRDSKNQNDEKYFNLKAVFEQLDKEEQTYFLEQFIPKICQLVLKIKKKQLKNQIPKESKIYEAAFSREEISYYVSCMFLCILKDQDRKIYKDFRLIY-LKDLVQQINIRRQEKIKCFYEYLKQALDFSEKESKEVVIFQRINCGQLEDYENWVDKLKAIKLKNVQLTDDKLIEDFPGTLQVDFANCDIGGGILGNGLVQEEIRFCVCPEMLVSLLVFDQSMEANEVIIMKGIKQYSDYQGYSNSFRFVKMGNSKIQKQKRTNPQTILAIDALCFNSSDNQFSEVNVSRELNKSYMGFKQEDQLKTISTGKWGCGAFLGVFDLKFAIQWIASSRSNKKMIICTFQDEQTTKQIQQVFDLYKQKNASIFLKLVMDYPNSKYMEDYTLLEYLIELGKEKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EPQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54849 for 2030 contacts (-27.0/contact) +
2D Compatibility (PS) -30791 + (NN) -11653 + (LL) -172
1D Compatibility (HY) -13200 + (ID) 2550
Total energy: -113215.0 ( -55.77 by residue)
QMean score : 0.127
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