Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQQSTRTDITVNVDGFWMLQALLDIRHVAPELRCRPYVSTDSNDWLNEHPGMAVMREQGIVVNDAVNEQVAARMKVLAAPDLEVVALLSRGKLLYGVIDDENQPPGSRDIPDNEFRVVLARRGQHWVSAVRVGNDITVDDVTVSDSASIAALVMDGLESIHHADPAAINAVNVPMEEMLEATKSWQESGFNVFSGGDLRRMGISAATVAALGQALSDPAAEVAVYARQYRDDAKGPSASVLSLKDGSGGRIALYQQARTAGSGEAWLAICPATPQLVQVGVKTVLDTLPYGEWKTHSRV |
| 1L2O Chain:C ((85-137)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DYMEAFKTFDREGQGFISGAELRHV------LTALGERLSDEDVDEIIKLTDLQEDLEG---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L2O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2093 for 266 contacts (-7.9/contact) +
2D Compatibility (PS) -5545 + (NN) -1923 + (LL) 16404
1D Compatibility (HY) -3600 + (ID) 800
Total energy: 2443.0 ( 9.18 by residue)
QMean score : 0.032
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