Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | QDTFIAAVYEHAAILPNATLTPVSREEALALMNRNLDILEGAITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHKQNLF---------MGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMNVLPHLSAVEFHSAWAMGMRVNFLAS---NIHYPSKKMTGSGIYAPNSSRAFHYDMKTEEGKLLLSQLDSHPSHSAVVNWTSYASSIEALSSGNKEFKGTVFFDEFTFVKLTGVAGNYTVCQKDLCCHLSYKMSENIPNEVYALGAFDGLHTVEGRYYLQICTLLKCKTTNLNTCGDSAETASTRFEMFSLSGTFGTQYVFPEVLLSENQLAPGEFQVSTDGRLFSLKPTSGPVLTVTLFGRLYEKDWASNASSG |
1EMS Chain:A ((10-440)) | -------------MATGRHFIAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDF------------------IGLNKNEQIDLAMATDCEYMEKYRELARKHNIWLSLGGLHHKD--------PSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTEMIPPVDTPIGRLGLSICYDVRF-PELSLWNRKRGAQLLSFPSAFTLNTGLAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPW------------GAVVAQCSERVDMCFAEIDLSYVDTLREMQPVFSHRRSDLYTLHINEKSSETG---GLKFARFNIPADHIFYSTPH-------SFVFVNLKPVTDGHVLVSPKRVVPRLTDL----TDAETADLFIVAKKVQAMLEKHHNVTSTTICVQDGKDAGQTVPH--VHIHILPRRAGDFPRS--NEQMAEEAVVYRNLM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EMS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131246 for 3314 contacts (-39.6/contact) +
2D Compatibility (PS) -42074 + (NN) -4804 + (LL) 3348
1D Compatibility (HY) -1600 + (ID) 2950
Total energy: -179326.0 ( -54.11 by residue)
QMean score : 0.161
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