Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GEGVSYSDGHFLTKSGGVINFRKTRVT-SITITILGNYGLRVVNGELQNTPLTFKGADFKSSTLKDELLIPLEGAVQLNTAPSTA-LCIFITTDHVYRELCMMQFLTDVDKTPFLVVLRSESKHETIQYMHIVTVHPFLSLTA
3ZPE Chain:A ((53-190))
GRA---TNGQFVTKTAKVLRYKFVRWDALLIIQFIDNIGVMENPTFYRNKSIELRSADFLSPMLNNTYIVPLNGGVRVESPTIPVQLEVILENNSSFIQVGFVR-LTVKNGNPHMIIQCNPVPGN-IKMIKIKSVMLFTCLIG
General information:
TITO was launched using:
RESULT:
Template:
3ZPE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91939 for 946 contacts (-97.2/contact) +
2D Compatibility (PS) -14484 + (NN) 601 + (LL) 440
1D Compatibility (HY) -12800 + (ID) 1450
Total energy: -119632.0 ( -126.46 by residue)
QMean score : 0.402
(partial model without unconserved sides chains):
PDB file :
Tito_3ZPE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZPE-query.scw
PDB file :
Tito_Scwrl_3ZPE.pdb
: