Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADCAAHDESPGNNVVDISVPPTTD
2HV8 Chain:A ((5-172))
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HV8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107554 for 1334 contacts (-80.6/contact) +
2D Compatibility (PS) -18548 + (NN) -7360 + (LL) 1080
1D Compatibility (HY) -23600 + (ID) 8150
Total energy: -164132.0 ( -123.04 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_2HV8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HV8-query.scw
PDB file :
Tito_Scwrl_2HV8.pdb
: