Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GALTTSTRQGSRVVGFMDFIIALGWQIIPSNIRYIYILNCSQFMPTSDVTTIYFQAD--SGLESIFVMDSPFYASCTQQLPDKTIKTYGVTISKKQSIISINFSSSLEPNIMVSAWTASITRTQ
1C8O Chain:A ((128-168))
------------------------------------------------ISAVYFKAKWLMPFEKEFTSDYPFYVSPTEMVDVSMMSMYG-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1C8O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -271 for 135 contacts (-2.0/contact) +
2D Compatibility (PS) -4004 + (NN) 1365 + (LL) 6108
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -252.0 ( -1.87 by residue)
QMean score : -0.051
(partial model without unconserved sides chains):
PDB file :
Tito_1C8O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C8O-query.scw
PDB file :
Tito_Scwrl_1C8O.pdb
: