Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKKTVRFGEQAAVPAIGLGTWYM--GEHAAQRQQEVAALRAGIDHGLTVIDTAEMYADGGAEEVVGQAIRG---LRDRVVLVSKVYPWHAGKAAMHRACENSLRRLQTDYLDMYLLHWRGDIPLQETVEAMEKLVAEGKIRRWGVSNLDIEDMQALWRTADGEHCATNQVLYHLASRGIEYDLLPWCQQHSLPVMAYCPLAQAGRLRDGLFQHSDIINMANARGITVAQLLLAWVIRHPGVLAIPKAASIEHVVQNAAALDIVLSGEELAQLDRLYPPPQRKNRLDMV
3D3F Chain:A ((4-260))-LKDTVKLHNGVEMPWFGLGVFKVENGNEATE------SVKAAIKNGYRSIDTAAIYKN---EEGVGIGIKESGVAREELFITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDKYKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIK-PMVNQVEFH--PRLTQKELRDYCKGQGIQLEAWSPLMQ-GQLLD----NEVLTQIAEKHNKSVAQVILRWDLQH-GVVTIPKSIKEHRIIENADIFDFELSQEDMDKIDAL-------------


General information:
TITO was launched using:
RESULT:

Template: 3D3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -180619 for 2165 contacts (-83.4/contact) +
2D Compatibility (PS) -27862 + (NN) -11858 + (LL) 1888
1D Compatibility (HY) -21200 + (ID) 4600
Total energy: -244251.0 ( -112.82 by residue)
QMean score : 0.476

(partial model without unconserved sides chains):
PDB file : Tito_3D3F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3D3F-query.scw
PDB file : Tito_Scwrl_3D3F.pdb: