Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVKRRTFLQGAAGAIGLAMAQGALSKIVYAQGAAGTLRVAIAKPAGNLDPQSHYAIWAIQDLMFEPLVKYGKGGQIEPCLATDWKIEDGGKTLHLTLREGVKFQDGTKFDAAACKWNLERWMGIDQ-FSWMNCSKHFQSLEVVDDYHITVHFKEPVLALMQELSYTRPTRFLSP---KSVDADGKFKEPVGTGPWV-QISADDTQSVFEHYDGYWGDKPTYERLEAKVIPDARSRVAALRAGEIDLV-GGFWIAPLTPEEGKQLEAAGFNVVVDPGNVTLVMAFNPDRAEPLKDPQVRKAVSIGIDRAAISKVLYHGYAKPAGNMFSAALPYAGKQFDAPVRDAAAASALLEKAGWT---GSPIRSKDGKPLTLEL-VVSPDAVPGSRVIAEVIQSEMKEVGIDLVIRSVDHASKHTDMLEQKYDLGFFLTYGAPYDPFGSLVALCLSTFKNDVEGKLVTDPVNLDPLINAATAATGD-QIEPTIQKVYDWLRDNDAIAPLVYVPSIWAHSKRVQGFTSPVTEYDMPYENIVLAE |
3MVW Chain:A ((30-497)) | ------------------------------------------------------------QSMVYEPLVKYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKFSNGEPFDAEAAAENFRAVLDNRQRHAWLELANQIVDVKALSKTELQITLKSAYYPFLQELALPRPFRFIAPSQFKNHETMNGIKAPIGTGPWILQESKLNQYDVFVRNENYWGEKPAIKKITFNVIPDPTTRAVAFETGDIDLLYGNEGLLPLD-TFARFSQNPAYHTQLSQPIETVMLALNTAKA-PTNELAVREALNYAVNKKSLIDNALYGTQQVADTLFAPSVPYANLGLKPSQYDPQKAKALLEKAGWTLPAGKDIREKNGQPLRIELSFIGTDAL--SKSMAEIIQADMRQIGADVSLIGEEESSIYARQRDGRFGMIFHRTWGAPYDPHAFLSSMRVPSHADFQAQQGLADKPLIDKEIGEVLATHDETQRQALYRDILTRLHDEAVYLPISYISMMVVSKPELGNIPYAPIATEIPFEQI---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MVW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206365 for 3701 contacts (-55.8/contact) +
2D Compatibility (PS) -49577 + (NN) -26598 + (LL) 5044
1D Compatibility (HY) -28400 + (ID) 6700
Total energy: -312596.0 ( -84.46 by residue)
QMean score : 0.427
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