Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SDTRKAIDTISNLLKIKPIYIESMLQEMGPRQTQMFIRSTSNGSAEEVRKAAYLVFIYHTFIKNPSDENVELWRNT------LIRAQISPILAAEHTDAALFYFAELDLDAFELAQFRRHYNLHFNPEPGTLLH
1GCC Chain:A ((1-63))
------------------------------------------KHYRGVRQRPWG--KFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRV---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1GCC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15064 for 336 contacts (-44.8/contact) +
2D Compatibility (PS) -6105 + (NN) -1474 + (LL) 5036
1D Compatibility (HY) 0 + (ID) 450
Total energy: -18057.0 ( -53.74 by residue)
QMean score : 0.031
(partial model without unconserved sides chains):
PDB file :
Tito_1GCC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GCC-query.scw
PDB file :
Tito_Scwrl_1GCC.pdb
: