Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATTRSLDHAKAEAELAINIKKATSPEETAPKRKHVRSCIVYTWDHKSSLSFWAGLKVQPILADE----------VQTFKALITIHKVLQEGHPVTLREAMANRGWIDSLSRGMMGEGVRGY--GPLIREYVHFLLAKLSFHKQHPEFNGTFEYEEYISLKAIHDPNEGYETITDLMTLQDKIDQFQKLIFSHFRHIGNNECRISALVPLVAESYGIYKFITSMLRAMHSSTGDNEALEPLRQRYDAQHYRLVKFYYECSNLRYLTSLITIPKL |
| 1HG2 Chain:A ((19-140)) | ------------GSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNI---------PQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFI-QYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQ---------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36729 for 720 contacts (-51.0/contact) +
2D Compatibility (PS) -11925 + (NN) -8706 + (LL) 11396
1D Compatibility (HY) -5600 + (ID) 1750
Total energy: -53314.0 ( -74.05 by residue)
QMean score : 0.186
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