Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVSSNGGAIKAVIYDCDGVMFD-SFEANLAFYQRIMEMMGRPRLSRDNEEQMRILHTYANREVLAHFFPSPGD-WEEA-VRCAGAIDYRELVPLMIMEEGFREALDTLK-GRVGLGVCTNRSTS-MDMVLRLFSLDSYFSIVMTASRVTNPKPHPEPLLKVLEHFGIGP-REALFVGDSEVDRLSAEAAGVPFVAYKAPLPAAYRMEHHREIIDLLG
3KZX Chain:A ((27-203))
-----------AVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNIDLD---------SIPNSTIPKYLITLLGKRWKEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKY---------------------
General information:
TITO was launched using:
RESULT:
Template:
3KZX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120906 for 1307 contacts (-92.5/contact) +
2D Compatibility (PS) -19219 + (NN) -16855 + (LL) 3156
1D Compatibility (HY) -10800 + (ID) 2250
Total energy: -166874.0 ( -127.68 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_3KZX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KZX-query.scw
PDB file :
Tito_Scwrl_3KZX.pdb
: