Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGHTQQPSGRGNPRPAPSPSPVPGTVPGASERVALKKEIGLLSACTIIIGNIIGSGIFISPKGVLEHSGSVGLALFVWVLGGGVTALG-SLCYAELGVAIPKSGGDYAYVTEIFGGLAGF---LLLWSAVLIMYPTSLAVISMTFSNYVLQPVFPNCIPPTTASRVLSMACLMLLTWV----NSSSVRWATRIQDMFTGGKLLALSLIIGVGLLQIFQGHFEELRPSNAFAFWMTPSVGHLALAFLQGSFAFSGWNFLNYVTEEMV-----DARKNLPRAIFISIPLVTFVYTFTNIAYFTAMSPQELLSSNAVAVTFGEKLLGYFSWVMPVSVALSTFGGINGYLFTYSRLCFSGAREGHLPSLLAMIHVRHCTPIPALLVCCGATAVIMLVGDTYTLINYVSFINYLCYGVTILGLLLLRWRRPALHRPIKVNLLIPVAYLVFWAFLLVFSFISEPMVCGVGVIIILTGVPIFFLGVFWRSKPKCVHRLTESMTHWGQELCFVVYPQDAPEEEENGPCPPSLLPATDKPSKPQ |
3LRC Chain:A ((6-329)) | -----------------------------------DAHKVGLIPVTLMVSGNIMGSGVFLLPAN-LASTG--GIAIYGWLV-TIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIG-NIAMVVIGVGYLSY----FFPILKDPL----VLTITCVVVL-WIFVLLNIVGPKMITRVQAVAT---VLALIPIVGIAVFGWFW-----FRGETYMAAWNVSGLGTFGA--IQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTA-IMGMIPN------------------TAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVN-KAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNP----------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LRC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -238469 for 2411 contacts (-98.9/contact) +
2D Compatibility (PS) -29383 + (NN) -4049 + (LL) 6860
1D Compatibility (HY) -30000 + (ID) 4000
Total energy: -299041.0 ( -124.03 by residue)
QMean score : 0.211
|
|
|