Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNG------QRVYTSMSDCLIKTVRSEGYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQL---SKDGQKLTLLKEMLAGCGAGTCQVIVTTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAPRPTATQLTRDLLRSRGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSAAAVAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPLFGIAQVVYFLGIAESLLGLLQDPQA
4C9H Chain:A ((27-287))-----------FLMGGVSAAVAKTAASPIERVKLLIQNQDEMLKQGTLDRKYAGILDCFKRTATQEGVISFWRGNTANVIRYFPTQALNFAFKDKIKAMFGFKKEEGYAKWFAGNLASGGAAGALSLLFVYSLDY-------------ARTRLAADS-------ARQFNGLIDVYKKT--------LKSDGVAGLYRGFLPSVVGIVVYRGLYFGMYDSLK-------------LASFLLGWVVTTGASTCSYPLDTVRRRM--MMTSGQAVKYDGAFDCLRKIVAAEGVGSLFKGCGANILRGVAGAGVISMYDQLQMILFGKKFK-----


General information:
TITO was launched using:
RESULT:

Template: 4C9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42018 for 1672 contacts (-25.1/contact) +
2D Compatibility (PS) -24196 + (NN) 382 + (LL) 4224
1D Compatibility (HY) -14000 + (ID) 3300
Total energy: -78908.0 ( -47.19 by residue)
QMean score : 0.147

(partial model without unconserved sides chains):
PDB file : Tito_4C9H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C9H-query.scw
PDB file : Tito_Scwrl_4C9H.pdb: