Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSALNWKPFVYGGLASITAECGTFPIDLTKTRLQIQGQTNDAKFKEIRYRGMLHALVRIGREEGLKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFIERPED---ETLPINVICGILSGVISSTIANPTDVLKIRMQAQSNTIQGGMIGNF---MNIYQQ----EGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRVLRDGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFVTYEQLKKLDL |
| 4C9H Chain:A ((27-309)) | --------FLMGGVSAAVAKTAASPIERVKLLIQNQDEMLKQGTLDRKYAGILDCFKRTATQEGVISFWRGNTANVIRYFPTQALNFAFKDKIKAMFGFKKEEGYAKWFAGNLASGGAAGALSLLFVYSLDYARTRLAADS-------ARQFNGLIDVYKKTLKSDGVAGLYRGFLPSVVGIVVYRGLYFGMYD-SLK------------LASFLLGWVVTTGASTCSYPLDTVRRRMM----MTSGQAVKYDGAFDCLRKIVAAEGVGSLFKGCGANILR-GVAGAGVISMYDQLQMILF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52946 for 1901 contacts (-27.9/contact) +
2D Compatibility (PS) -25657 + (NN) 6271 + (LL) 2152
1D Compatibility (HY) -11600 + (ID) 3300
Total energy: -85080.0 ( -44.76 by residue)
QMean score : 0.151
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