Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALDFLAGCAGGVAGVLVGHPFDTVKVRLQVQSVEKPQ------YRGTLHCFKSIIKQESVLGLYKGLGSPLMGLTFINALVFGVQGNTLRALGHDSP------LNQFLAGAAAGAIQCVICCPMELAKTRL----QLQDAGPARTYKGSLDCLAQIYGHEGLRGVNRGMVSTLLRETPSFGVYFLTYDALTRALGCEPGDRLLVPKLLLAGGTSGIVSWLST-------YPVDVVKSRLQADGLRGAPRYRGILDCVHQSYRAEGWRVFTRGLASTLLRAFPVNAATFATVTVVLTYARGEEAGPEGEAVPAAPAGPALAQPSSL |
| 4C9Q Chain:A ((27-299)) | FAINFLMGGVSAAIAKTAASPIERVKILIQNQDEMIKQGTLDKKYSGIVDCFKRTAKQEGLISFWRGNTANVIRYFPTQALNFAFKDKIKLMFGFKKEGYGKWFAGNLASGGAAGALSLLFVYSLDFARTRLAADAKS-----ARQFNGLTDVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFGMFDSLKPL---------FLASFLLG--------WVVTTGASTCSYPLDTVRRRMMMTSGQ-AVKYNGAIDCLKKIVASEGVGSLFKGCGANILRSVAGAGVISMYDQLQMILFGK------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72635 for 1663 contacts (-43.7/contact) +
2D Compatibility (PS) -24033 + (NN) 1657 + (LL) 1464
1D Compatibility (HY) -17600 + (ID) 3200
Total energy: -114347.0 ( -68.76 by residue)
QMean score : 0.152
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