Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTFSEILDRVGSMGHFQFLHVAILGLPILNMANHNLLQIFTAATPVHHCRPPHNASTGPWVLPMGPNGKPERCLRFVHPPNASLPNDTQRAMEPCL-DGWVYNSTKD----SIVTEWDLVCNSNKLKEMAQSIFMAGILIGGLVLGDLSDRFGRRPILTCSYLLLAASGSGAAFS---PTFPIYMVFRFLCGFGISGITLSTVILNV-EWVPTRMRAIMSTALGYCYTFGQFI-----LPGLAYAIPQWRWLQLTVSIPFFVFFLSSWWTPESIRWLVLS----GKSSKALKILRRVAVFNGKKEEGERLSLEELKLNLQKEISLAKAKYTASDLFRIPMLRR---MTFCLSLAWFATGFA---YYSLAMGVEEFGVNLYILQIIFGG-VDVPAKFITILSLSYLGRHTTQAAALL-LAGGAILALTFVPLDLQ----TVRTVLAVFGKGCLSSSFSCLFLYTSELYPTVIRQTGMGVSNLWTRVGSMVSPLVKITGEVQPFIPNIIYGITALLGGSAALFLPETLNQPLPETIEDLENWSLRAKKPKQEPEVEKASQRIPLQPHGPGLGSS |
| 4PYP Chain:A ((9-374)) | --------------------------------------------------------TGRLMLAVG--GAVLGSLQFGY--NTGVINAPQKVIEEFYTQTWVHRYGESILPTTLTTLWSL----------SVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLGKSFEMLILGRFIIGV-YCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNKDLWPLLLSIIFIPALLQCIVLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVTHDLQEMKEESRQMMR----------EKKVTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSI-FEKAGVQQPVYATIGSGIVNTAFTVVSLFVVQRAGRRTLHLIGLAGMAGCAILMTIALALLEQLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPYVFIIFTVLLVLFFIFTYFKVPET------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172947 for 2513 contacts (-68.8/contact) +
2D Compatibility (PS) -34111 + (NN) -29 + (LL) 7256
1D Compatibility (HY) -23600 + (ID) 4850
Total energy: -228281.0 ( -90.84 by residue)
QMean score : 0.120
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