Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFQDLLDQVGGLGRFQILQMVFLIMFNVIVYHQTQLENFAAFILDHRCWVHILDNDTIPDNDPGTLSQDALLRISIPFDSNLRPEKCRRFVHPQWKLIHLNGTFPNTSEPDTEPCVDGWVYDQSSFPSTIVTKWDLVCESQPLNSVAKFLFMAGMMVGGNLYGHLSDRFGRKFVLRWSYLQLAIVGTCAA---------------------FAPTILVYCSLRFLAGAATFSIIVNTVLLIVEWITHQFCAMALTLTLCAASIGHITLGSLAFVIR------------------DQCILQLVMSAPCFVFFLFSRWLAESARWLIINNKPEEGLKELRKAAHRNGMKNAEDILTMEVLKSTMKQELEAAQKKHSLCELLRIPNICKRICFLSFVRFAS-TIPFWGLTLHLQHLGNNVFLLQTLF-GAVTLLANCVAPWALNHMSRRLSQMLLMFLLATCL--LAIIFVPQE--MQTLRVVLATLGVGAASLGITCSTAQENELIPSIIRGRATGITGN---FANIGGALASLMM-----ILSIYSRPLPWIIYGVFAILSGLVVL-LLPETRNQPL--LDSIQDVENEGVNSLAAPQRSSVL |
4JA4 Chain:A ((67-479)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------GCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIY---RIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECI-------PALLFLMLLYTVPESPRWLM----QEQAEGILRKI-----MGNT---LATQAVQE-IKHSLDHG--------MFGVGVIVIGVMLSIFQQFVGINVVLYYAPEV---------LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLL-SEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSW------NGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249327 for 2459 contacts (-101.4/contact) +
2D Compatibility (PS) -33494 + (NN) -8887 + (LL) 14896
1D Compatibility (HY) -32400 + (ID) 4200
Total energy: -313412.0 ( -127.46 by residue)
QMean score : 0.174
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