Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPVEEFVAGWISGALGLVLGHPFDTVKVRLQTQT----------TYRGIVDCMVKIYRHESLLGFFKGMSFPIASIAVVNSVLFGVYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEPRAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEGLCRQYTPEGQNPSSATVLVAGGFAG--IASWVAAT-------PLDMIKSRMQMDGLRRRVYQGMLDCMVSSIRQEGLGVFFRGVTINSARAFPVNAVTFLSYEYLLRWWG |
| 4C9H Chain:A ((26-294)) | ----DFLMGGVSAAVAKTAASPIERVKLLIQNQDEMLKQGTLDRKYAGILDCFKRTATQEGVISFWRGNTANVIRYFPTQALNF-AFKDKIKAMFGFKKEEGYAKW--FAGNLASGGAAGALSLLFVYSLDYARTRLAADS-------AR--QFNGLIDVYKKTLKSDGVAGLYRGFLPSVVGIVVYRGLYFGMYDSL---------K------------LASFLLGWVVTTGASTCSYPLDTVRRRMMMTSGQAVKYDGAFDCLRKIVAAEGVGSLFKGCGANILRGVAGAGVISMYDQLQMILFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85027 for 1662 contacts (-51.2/contact) +
2D Compatibility (PS) -23575 + (NN) 1882 + (LL) 584
1D Compatibility (HY) -11600 + (ID) 2850
Total energy: -120586.0 ( -72.55 by residue)
QMean score : 0.114
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