Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSSVKTPALEELVPGSEEKPKGRSPLSWGSLFGHRSEKIVFAKSDGGTDENVLTVTITETTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGCVKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGRPSDREEREELQLQPGRGAAASDRRSPVPPSERHGVRPHGENLPGDFQVPQALHRVALSMALPCPMLPAS |
| 2PA8 Chain:L ((16-65)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIEGEDHTLGNLI--AGTLRRISGVSFASYYQPHPLSDKIIVKILTDGSITPKDALLKAIENIRGMTSHYIDEIKGLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PA8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17778 for 286 contacts (62.2/contact) +
2D Compatibility (PS) -5179 + (NN) -2442 + (LL) 14036
1D Compatibility (HY) 400 + (ID) 450
Total energy: 24143.0 ( 84.42 by residue)
QMean score : 0.187
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