Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFAFQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISD-HYGRKFPMILSSVG-ALATSVWLCLLCYF-------AFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTI-----RIAIIDFLLGLVTGLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMS-CSEGFK-NLFYRTYMLFKNASGKRRFL-------LCLLLFTVITY-FFVVIGIAPIFILYELDSPLCWNEVFIGYGSALGSASFLT-SFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVP-FL-FTI----------VPFSVLRSM-LSKVVRSTEQGTLFACIA--FLETLGGVTAVSTFNG-IYSATVAWYPGFTFLLSAGLLLLPAISLC------VVKCTSWNEGSYELLIQEESSEDASDR-- |
| 4OY2 Chain:A ((10-502)) | NLNIQHSQPAINLQSPFYKVAVP---RYQLRHFHRENFGSHIRPGTKIVF-SKLKARKRKRDKGKDVKESFSTSQDLTIGDTAP----------VYLMEYSEQTPVALSKFGMAN------KLINYYRKANEQDTLRPKLPVGETHVLGV-QDKSPFWN--FGFVE---PGHIVPTLYNNMIRAPVFKHDISGTDFLLTKSSGF-----GISNRFYLRNINHLFTVGQT--FPVEEIPGPNSRKVT-SMKATRLKMIIYRILNHNHSKAISIDPIAKHFPDQDYGQNRQKVKEFMKYQRDGPEKGLWRLKDDEKLLDNEAVKSLITPEQISQVESMS------QGLQFQEDNEAY-NFDSKLKSLEENLLPWNITKNFINSTQMRAMIQIHGVGDPTGCGEGFSFLKTSMKHSYNVAQQQKAYDEEIAKTWYTHTKSLSISNPFEEMTNPDEINQTNKHVKTDRDDKKILKIVRKKRDENGIIQRQTIFIRDPRVIQGYIKIKEQDKEDVN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173482 for 2426 contacts (-71.5/contact) +
2D Compatibility (PS) -40541 + (NN) 17021 + (LL) 4372
1D Compatibility (HY) 32800 + (ID) 1200
Total energy: -161030.0 ( -66.38 by residue)
QMean score : -0.034
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