Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRWLRDFVLPTAACQDAEQPTRYETLFQALDRNGDGVVDIGELQEGLRNLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLKDHEKKMKLAFKSLDKNNDGKIEASEIVQSLQTLGLTISEQQAELILQSIDVDGTMTVDWNEWRDYFLFNPVTDIEEIIRFWKHSTGIDIGDSLTIPDEFTEDEKKSGQWWRQLLAGGIAGAVSRTSTAPLDRLKIMMQ------VHGSKSDK-MNIFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLL---TEEGQKIGTFERFISGSMAGATAQTFIYPMEVMKTRLAV--GKTGQYSGIYDCAKKILKHEGLGAFYKGYVPNLLGIIPYAGIDLAVYELLKSYWLDNFAKDSVNPGVMVLLGCGALSSTCGQLASYPLALVRTRMQAQAMLEGSPQLNMVGLF---RRIISKEGIPGLYRGITPNFMKVLPAVGISYVVYENMKQTLGVTQK |
| 4C9H Chain:A ((27-301)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLMGGVSAAVAKTAASPIERVKLLIQNQDEMLKQGTLDRKYAGILDCFKRTATQEGVISFWRGNTANVIRYFPTQALNFAFKDKIKAMFGFKKEEGYAKWFAGNLASGGAAGALSLLFVYSLDYARTRLAADS--ARQFNGLIDVYKKTLKSDGVAGLYRGFLPSVVGIVVYRGLYFGMYDSLK------------LASFLL----GWVVTTGASTCSYPLDTVRRRM----MMTSGQAVKYDGAFDCLRKIVAAEGVGSLFKGCGANILRGVAGAGVISMYDQLQMILFGKKFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57153 for 1724 contacts (-33.2/contact) +
2D Compatibility (PS) -25038 + (NN) 2039 + (LL) 14196
1D Compatibility (HY) -20800 + (ID) 4000
Total energy: -90756.0 ( -52.64 by residue)
QMean score : 0.213
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