Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVGFKATDVPPTAT---VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGPVRATASAQYRGVMGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAS---IGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVNAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIAS----PVDVVKTRYMNSALGQ---YSSAGHCALTMLQKEGPRAFYKGFMPSFLR--LGSWNVVMFVTYEQLKRALMAACTSREAPF |
| 4C9Q Chain:A ((19-316)) | -------DAKQQETNFAINFLMGGVSAAIAKTAASPIE--RVKILIQNQDEMIKQGTLDKKYSGIVDCFKRTAKQEGLISFWRGNTANVIRYFPTQALNFAFKDKIKLMFGFKKE-GYGKWFAGNLASGGAAGALSLLFVYSLDFARTRLAADAKS--ARQFNGLTDVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFGMFDSLKPL--------------FLASFLLGWVVTTGASTCSYPLDTVRRRMMMTS-GQAVKYNGAIDCLKKIVASEGVGSLFKGCGANILRSVAGAGVISM---YDQLQMILFGK-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4C9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -30433 for 1952 contacts (-15.6/contact) +
2D Compatibility (PS) -27232 + (NN) 2208 + (LL) 2748
1D Compatibility (HY) -13200 + (ID) 3600
Total energy: -69509.0 ( -35.61 by residue)
QMean score : 0.087
|
|
|