Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEDSPTMVRVDSPTMVRGENQVSPCQGRRCFPKALGYVTGDMKELANQLKDKPVVLQFIDWILRGISQVVFVNNPVSGILILVGLLVQNPWWALTGWLGTVVSTLMALLLSQDRSLIASGLYGYNATLVGVLMAVFSDKGDYFWWLLLPVCAMSMTCPIFSSALNSMLSKWDLPVFTLPFNMALSMYLSATGHYNPFFPAKLVIPITTAPNISWSDLSALELLKSIPVGVGQIYGCDNPWTGGIFLGAILLSSPLMCLHAAIGSLLGIAAGLSLSAPFEDIYFGLWGFNSSLACIAMGGMF---MALTWQTHLLALGCALFTAYLGVGMANFMAEVGLPACTWPFCLATLLFLIMTTKNSNIYKMPLSKVTYPEENRIFYLQAKKRMVESPL |
| 3J2Z Chain:B ((59-194)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HYNQKFKDKATLTVDKSSSTAYMQLSSLTSEDSA------VYYCARGVTRGYF--DVWGTGTTVTVSSAKTTAPSVY-------PLAPVCGGTTGSSVTLGCL-VKGYFPEPVTLTWNSGSLSSGVHTFPALLQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIEPR------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75396 for 696 contacts (-108.3/contact) +
2D Compatibility (PS) -13744 + (NN) 3086 + (LL) 16576
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -78028.0 ( -112.11 by residue)
QMean score : -0.196
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