Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | SNINKAKVASVESDYSSIKSAALSYYSDTNKIPVTPDGQTGLNVLETYMESLPDKADIGGEYKLIKVGNKLVLQIGKDGEGVTLTEAQSAKLLSDIGKDKIYTGVTGDNFGEQLKDTTKIDNKALYIVLIDNTVMDSTK |
| M060 Chain:A ((6-113)) | SNINKAKVASVESDYSSIKSAALSYYSDTNKIPVTPDGQTGLNV-------------IGGEYKLIKVGNKLVLQIGKDGEGVTLTEAQSAKLLSDIGKDKIYTGVTGD------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: M060.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 36790 for 525 contacts (70.1/contact) +
2D Compatibility (PS) -9187 + (NN) 690 + (LL) 2448
1D Compatibility (HY) 6400 + (ID) 300
Total energy: 36841.0 ( 70.17 by residue)
QMean score : -0.073
|
|
|