Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MMDSEAHEKRPPILTSSKQDISPHITNVGEMKHYLCGCCAAFNNVAIT--FPIQKVLFRQQLYGIKTRDAILQLRRDGFRNLYRGILPPLMQKTTTLALMFGLYEDLSCLL--HKHVSAPEFATSGVAAVLA-GTTEAIFT--PLERVQTLLQDHKHHDKFTNTYQAFKA------------LKCHGIGEYYRGLVPILFRNGLSNVLFFGL-------RGPIKEHLPTATTHS-AHLVNDFICGGLLGAMLGFLFFPINVVKTRIQSQIGGEFQSFPKVFQKIWLERDRK------LINLFRGAHLNYHRSLISWGIINATYEFLLKVI----------------- |
| 3GMI Chain:A ((1-356)) | QAMLIGEIMDLNLKNFLEDREEIIRDAKRKDEKSFKDFKKIVEEIKERENKDKIVCDFTEYNPLHKGHKYALEKGKEHGIFISVLPGPLERSGRG-IPYFLNRYIRAEMAIRAGADIVVEGPPMGIMGSGQYMRCLIKMFYSLGAEIIPRGYIPEKTMEKVIDCINKGYHIQVKPYKIICIETGEILGEKLNIDNYVIASMSQMIYKLNREGLKFNPKFVFVKRLEGISGTKIREAIFSGKFEDIKNMLPKTTLSILKELYDNGKLNELILKRFEDRILETANEYDLYEYLPSNVAEILEKKRPFNNIEEIKNSLPYGFSRHFRERILSKLEARIPNETLSKYINNYPAKIKILAVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133123 for 2197 contacts (-60.6/contact) +
2D Compatibility (PS) -30023 + (NN) 2261 + (LL) 204
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: -164581.0 ( -74.91 by residue)
QMean score : 0.156
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