Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKLARKSVPFIIAVALLAACLLAVGLSPLVLPDYKGTIEEREQPQNFNLLYLNSGEELNLYPWNLYTGQEQELFEEEIVSFAANSVRILGGGSWTDEELYPLIKFRYSGQDLRFLKDMALTEKDGRRYLVNMALDPNGLCYFSYVNQDEREATADEMDQALGKLQEDWEKFLSDPLPADSEVDLYEEKPSGSYQLDDGELKTDNAFYMFFMRCQMLSDQMRKEQYSDYIGDNLYTIWELVLKSEFTSLSYDNHIYAMYSNDGGTSMVLIYSPIEERFVGFSLKY |
| M062 Chain:A ((11-303)) | MMKLARKSVPFIIAVALLAACLL----------DYKGTIEEREQPQNFNLLYLNSGEELNLYPWNLYTGQEQELFEEEIVSFAANSVRILGGGSWTDEELYPLIKFRYSGQDLRFLKDMALTEKDGRRYLVNMALDPNGLCYFSYVNQDEREATADEMDQALGKLQEDWEKFLSDPLPADSEVDLYEEKPSGSYQLDDGELKTDNAFYMFFMRCQMLSDQMRKEQYSDYIGDNLYTIWELVLKSEFTSLSYDNHIYAMYSNDGGTSMVLIYSPIEERFVGFSLKY |
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General information:
TITO was launched using:
| RESULT:
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Template: M062.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22710 for 2099 contacts (10.8/contact) +
2D Compatibility (PS) -26850 + (NN) 1504 + (LL) 576
1D Compatibility (HY) 12400 + (ID) 650
Total energy: 9690.0 ( 4.62 by residue)
QMean score : 0.011
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