Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNSRRDFLKKGALAGFSALMIPEIAKAAVKENTSVHAPKINLKKDCVILFQGDSITDCGRDRNSNRCNTMEQFGSGYVLFTATQLLEGKAALQPKIYNRGISGNKVYQLRERWEIDCLAFQPDVLSILIGVNDYWHTLTHGYKGTVETYENDLRALLKYTKEKLPNTQIVLCEPFTLRDGAAIEDSKWYPMFDEFRKSARKLSEEFNTIFVPFQSGFDAAVKLAPARYWSNDGVHPDLPGRQLMANMWMEATGLK
M062 Chain:A ((41-268))
----------------------------------------INLKKDCVILFQGDSITDCGRDRNSNRCNTMEQFGSGYVLFTATQLLEGKAALQPKIYNRGISGNKVYQLRERWEIDCLAFQPDVLSILIGVNDYWHTLTHGYKGTVETYENDLRALLKYTKEKLPNTQIVLCEPFTLRDGAAIEDSKWYPMFDEFRKSARKLSEEFNTIFVPFQSGFDAAVKLAPARYWSNDGVHPDLPGRQLMANMWMEATGLK
General information:
TITO was launched using:
RESULT:
Template:
M062.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110057 for 1845 contacts (-59.7/contact) +
2D Compatibility (PS) -23650 + (NN) -11675 + (LL) 2952
1D Compatibility (HY) -31200 + (ID) 10800
Total energy: -184430.0 ( -99.96 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_M062.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M062-query.scw
PDB file :
Tito_Scwrl_M062.pdb
: