Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATTRSLDHAKAEAELAINIKKATSPEETAPKRKHVRSCIVYTWDHKSSLSFWAGLKVQPILADEVQTFKALITIHKVLQEGHPVTLREAMANRGWIDSLSRGMMGEGVRGYGPLIREYVHFLLAKLSFHKQHPEFNGTFEYEEYISLKAIHDPNEGYETITDLMTLQDKIDQFQKLIFSHFRHIGNNECRISALVPLVAESYGIYKFITSMLRAMHSSTGDNEALEPLRQRYDAQHYRLVKFYYECSNLRYLTSLITIPKL
M064 Chain:A ((13-313))
------------EAELAINIKKATSPEETAPKRKHVRSCIVYTWDHKSSLSFWAGLKVQPILADEVQTFKALITIHKVLQEGHPVTLREAMANRGWIDSLSRGMMGEGVRGYGPLIREYVHFLLAKLSFHKQHPEFNGT-------SLKAIHDPNEGYETITDLMTLQDKIDQFQKLIFSHFRHIGNNECRISALVPLVAESYGIYKFITSMLRAMHSSTGDNEALEPLRQRYDAQHYRLVKFYYECSNLRYLTSLITIPKL
General information:
TITO was launched using:
RESULT:
Template:
M064.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98472 for 1929 contacts (-51.0/contact) +
2D Compatibility (PS) -26045 + (NN) -14614 + (LL) 1856
1D Compatibility (HY) -35200 + (ID) 12150
Total energy: -184625.0 ( -95.71 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_M064.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M064-query.scw
PDB file :
Tito_Scwrl_M064.pdb
: