Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMVMKRPSLRQFSWLLGGSLLLGALFWLWLAVQQQEATLAIRPVGQGIGMPDGFSVWHHLDANGIRFKSITPQKDGLLIKFDSTAQGAAAKEVLGRALPHGYIIALLEDDNSPTAWLSRLRDAPHRLG
M067 Chain:A ((9-144))
MMVMKR--------LLGGSLLLGALFWLWLAVQQQEATLAIRPVGQGIGMPDGFSVWHHLDANGIRFKSITPQKDGLLIKFDSTAQGAAAKEVLGRALPHGYIIALLEDDNSPTAWLSRLRDAPHRLG
General information:
TITO was launched using:
RESULT:
Template:
M067.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28986 for 1113 contacts (-26.0/contact) +
2D Compatibility (PS) -10817 + (NN) 8652 + (LL) 488
1D Compatibility (HY) 6800 + (ID) 500
Total energy: -24363.0 ( -21.89 by residue)
QMean score : -0.024
(partial model without unconserved sides chains):
PDB file :
Tito_M067.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M067-query.scw
PDB file :
Tito_Scwrl_M067.pdb
: