Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATMAFHPMLCRLELSVSAAPPASPIDATLLRSLITSVLNSSWVDLGGNTANEKVLCAIGLIEAFCRERVIPPTSNSFNTSVTYHIMVEDLDPDDLGNIQLINKPLLSLEGDLKVLGSYQLTFQTIPGHSEPRSMTDNGIYHSDSPFFQIALGHALLGTGKIYDHITRALRVAPITIAPEKRKEPLSSYMV
M067 Chain:A ((13-193))
------------ELSVSAAPPASPIDATLLRSLITSVLNSSWVDLGGNTANEKVLCAIGLIEAFCRERVIPPTSNSFNTSVTYHIMVEDLDPDDLGNIQLINKPLLSLEGDLKVLGSYQLTFQTIPGHSEPRS-------HSDSPFFQIALGHALLGTGKIYDHITRALRVAPITIAPEKRKEPLSSYMV
General information:
TITO was launched using:
RESULT:
Template:
M067.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91269 for 1685 contacts (-54.2/contact) +
2D Compatibility (PS) -17180 + (NN) 5779 + (LL) 1528
1D Compatibility (HY) -24000 + (ID) 8550
Total energy: -133692.0 ( -79.34 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_M067.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M067-query.scw
PDB file :
Tito_Scwrl_M067.pdb
: