Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVGVSTSAPLSPTSGTSVGMSTFSIMDYVVFVLLLVLSLAIGLYHACRGWGRHTVGELLMADRKMGCLPVALSLLATFQSAVAILGVPSEIYRFGTQYWFLGCCYFLGLLIPAHIFIPVFYRLHLTSAYEYLELRFNKTVRVCGTVTFIFQMVIYMGVVLYAPSLALNAVTGFDLWLSVLALGIVCTVYTALGGLKAVIWTDVFQTLVMFLGQLAVIIVGSAKVGGLGRVWAVASQHGRISGFELDPDPFVRHTFWTLAFGGVFMMLSLYGVNQAQVQRYLSSRTEKAAVLSCYAVFPFQQVSLCVGCLIGLVMFAYYQEYPMSIQQAQAAPDQFVLYFVMDLLKGLPGLPGLFIACLFSGSLSTISSAFNSLATVTMEDLIRPWFPEFSEARAIMLSRGLAFGYGLLCLGMAYISSQMGPVLQAAISIFGMVGGPLLGLFCLGMFFPCANPPGAVVGL-LAGLVMAFWIGIGSIVTSMGSSMPPSPSNGSSFSLPTNLT-VATVTTLMPLTTFSKPTGLQRFYSLSYLWYSAHNSTTVIVVGLIVSLLTGRMRGRSLNPATIYPVLPKLLSLLPLSCQKRLHCRSYGQDHLDTGLFPEKPRNGVLGDSRDKEAMALDGTAYQGSSSTCILQETSL |
| 4QIQ Chain:A ((7-470)) | -------------------------SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRF--------GRRDSLKIAAVLFFISGVGSAW--PELGFT-SINPDNTVPVYLAG--------YVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVS--FNQFAIIFGQLLVYCVNYFIARSGDASWLNTD--------------GWRYMFASECIPALLFLMLLYTVPES--PRWLMTLATQAVQEIKHSLD--RLLMFGVGVIVIGVMLSIFQQFVGI---------NVVLYYAPEVFKTLG--ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGR---------KPLQIIGALGMAIGMFSLGTAFYT----------------------------------QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHF---------HNGFSYWIYGCMGVLAALFMWK-----------------------------------------FVPETKGKTL------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -419586 for 3616 contacts (-116.0/contact) +
2D Compatibility (PS) -44240 + (NN) -8280 + (LL) 10832
1D Compatibility (HY) -29200 + (ID) 4100
Total energy: -494574.0 ( -136.77 by residue)
QMean score : 0.281
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