Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
M068 Chain:A ((18-153))
-----------------TMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWG----------------------SEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
General information:
TITO was launched using:
RESULT:
Template:
M068.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9830 for 559 contacts (17.6/contact) +
2D Compatibility (PS) -12561 + (NN) -5423 + (LL) 1592
1D Compatibility (HY) -16800 + (ID) 5700
Total energy: -29062.0 ( -51.99 by residue)
QMean score : 0.229
(partial model without unconserved sides chains):
PDB file :
Tito_M068.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M068-query.scw
PDB file :
Tito_Scwrl_M068.pdb
: