Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVGVSTSAPLSPTSGTSVGMSTFSIMDYVVFVLLLVLSLAIGLYHACRGWGRHTVGELLMADRKMGCLPVALSLLATFQSAVAI-LGVPSEIYRFGTQYWFLGCCYFLGLLIPAHIFIPVFYRLHLTSAYEYLEL-RFNKTVRVCGTVTFIFQMVIYMGVVLYAPSLALNAVTGFDLWLSVLALGIVCT-VYTALGGLKAVIWTDVFQTLVMFLGQLAVIIVGSAKVGGLGRVWAVASQHGRISGFELDPDPFVRHTFWTLAFGGVFMMLSLYGVNQAQVQRYLSSRTEKAAVLSCYAVFPFQQVSLCVGCLIGLVMFAYYQEYPMSIQQAQAAPDQFVLYFV-MDLLKGLPGLPGLFIACLFSGSLSTISSAFNSLATVTMEDLIRPWFPEFSEARAIMLS---RGLAFGYGLLCLGMAY-ISSQMGPVLQAAISIFGMVG-----------------GPLLGLF------------------------------CLGMFFP----CANPPGAVVGLLAGL-----VMAFWIGIGSIVTSM-GSSMPPSPSNGSSFSLPTNLTVATVTTLMPLT---TFSKPTGLQRFYSLSYLWYSAHNSTTVIVVGLIVSLLTGRMRGRSLNPATIYPVLPKLLSLLP---LSCQKRLHCRSYGQDHLDTGLFPEKPRN-GVLGDSRDKEAMALDGTAYQGSSSTCILQETSL |
| 4RKN Chain:A ((43-702)) | MQMTKEAREIIAHPKGTKESRGVISLQDYIVEEQAMYDWLFKN-HPIFTKYGGKTVGKLVVKDRGEEWIEEGRGNDFSKASKRSGGEGFSSMMYRVARNS---------TLQYPNKFIGPEKCGECHPAQYETWSRSRHATTIRFPGEHPEVNNK-------LNDPVFDKDTA-------SILPQGITPDVVYCTVGHIRT-----KFGFFDAWLLRGTYHVEGGLLKNGTGQIVAGGNQWQRTWALNLSPEVAKKIKKWVPDF---PVTLEEYGDNGGYVRGLASYAAKYKKSMSFQA-----STSYCEVCHPWKFDFKNESEFYAALGNAKELQKHTISKGVSCEECHGAGGH-------LEGGSGLLISNCERCHQRFSYSPDLMRNNPLNAGKPDLALSSKFKSMGPGCGSEGSQTYFTAHYEKGMRCATCHDPHDVTGNVTGEKGIKGVSYNSEQGYLSSLYSKPKLKKECTDCHKEQAYIQSKADTHSKNSCASCHMPFMMSCENFYAIQFQDQAGFDTQRRAHIWKIDVDPARKSLVAGSTSKDPRDGKDWHFERNEEGRNFVDLMWACARTTWADKDQAEAKGCHSPVVSELKETLHFKDQKQVYNEVMGWQTPVKDKFTQVKVGIQGLYSLLEVKKLAPSDKTRVYELIEKAQDTVDLIEKDGSWGMHGFKYTKQRLD---AAVEYINEAQRIMKKSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RKN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -460695 for 4761 contacts (-96.8/contact) +
2D Compatibility (PS) -59042 + (NN) 18811 + (LL) 3472
1D Compatibility (HY) 5200 + (ID) 5700
Total energy: -497954.0 ( -104.59 by residue)
QMean score : 0.152
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