Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYMKKLKFITLTLAIIITLPMLQSCLDDNDHQSRSLVISTINQISEDSKEFYFTLDNGKTMFPSNSQAWGGEKFENGQRAFVIFNELEQPVNGYDYNIQVRDITKVLTKEIVTMDDEENTEEKIGDDKINATYMWISKDKKYLTIEFQYYSTHSEDKKHFLNLVINNKEADSAAENEDNTDDEYINLEFRHNSERDSPDHLGEGYVSFKLDKIEEQIEGKKGLNIRVRTLYDGIKNYKVQFP
M069 Chain:A ((29-259))
----------------------------NDHQSRSLVISTINQISEDSKEFYFTLDNGKTMFPSNSQAWGGEKFENGQRAFVIFNELEQPVNGYDYNIQVRDITKVLTKEIVTMDDEENTEEKIGDDKINATYMWISKDKKYLTIEFQYYSTHSEDKKHFLNLVINNKEADSAAENEDNTDDEYINLEFRHNSERDSPDHLGEGYVSFKLDKIEEQIEGKKGLNIRVRTLYDGIKNYKVQFP
General information:
TITO was launched using:
RESULT:
Template:
M069.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42038 for 1643 contacts (-25.6/contact) +
2D Compatibility (PS) -23215 + (NN) -12285 + (LL) 3068
1D Compatibility (HY) -26400 + (ID) 10700
Total energy: -111570.0 ( -67.91 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_M069.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M069-query.scw
PDB file :
Tito_Scwrl_M069.pdb
: