Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNSRRDFLKKGALAGFSALMIPEIAKAAVKENTSVHAPKINLKKDCVILFQGDSITDCGRDRNSNRCNTMEQFGSGYVLFTATQLLEGKAALQPKIYNRGISGNKVYQLRERWEIDCLAFQPDVLSILIGVNDYWHTLTHGYKGTVETYENDLRALLKYTKEKLPNTQIVLCEPFTLRDGAAIEDSKWYPMFDEFRKSARKLSEEFNTIFVPFQSGFDAAVKLAPARYWSNDGVHPDLPGRQLMANMWMEATGLK
M069 Chain:A ((41-275))
----------------------------------------INLKKDCVILFQGDSITDCGRDRNSNRCNTMEQFGSGYVLFTATQLLEGKAALQPKIYNRGISGNKVYQLRERWEIDCLAFQPDVLSILIGVNDYWHTLTHGYKGTVETYENDLRALLKYTKEKLPNTQIVLCEPFTLRDGAAIEDSKWYPMFDEFRKSARKLSEEFNTIFVPFQSGFDAAVKLAPARYWSNDGVHPDLPGRQLMANMWMEATGLK
General information:
TITO was launched using:
RESULT:
Template:
M069.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119649 for 1884 contacts (-63.5/contact) +
2D Compatibility (PS) -23561 + (NN) -8955 + (LL) 2952
1D Compatibility (HY) -31200 + (ID) 10800
Total energy: -191213.0 ( -101.49 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_M069.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M069-query.scw
PDB file :
Tito_Scwrl_M069.pdb
: