Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSNPAIQAAIDLTAGAAGGTACVLTGQPFDTMKVKMQTFPDLYRGLTDCCLKTYSQVGFRGFYKGTSPALIANIAENSVLFMCYGFCQQVVRKVAGLDKQAKLSDLQNAAAGSFASAFAALVLCPTELVKCRLQTMYEMETSGKIAKSQNTVWSVIKSILRKDGPLGFYHGLSSTLLREVPGYFFFFGGYELSRSFFASGRSKDELGPVPLMLSGGVGGICLWLAVYPVDCIKSRIQVLSMSGKQAGFIRTFINVVKNEGITALYSGLKPTMIRAFPANGALFLAYEYSRKLMMNQLEAY |
| 3VMA Chain:A ((553-631)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTETWIKLGVPKDQLHPVPAMLLGA-------LNLTPIE-VAQAFQTIASGGNRAP-LSALRSVIAEDG-KVLYQSF-PQAERAVPAQAAYLTLWTMQQVVQRGTGRQL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3VMA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -12613 for 424 contacts (-29.7/contact) +
2D Compatibility (PS) -8334 + (NN) -765 + (LL) 13704
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -14858.0 ( -35.04 by residue)
QMean score : 0.041
|
|
|