Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEHSEGAPGDPAGTVVPQELLEEMLWFFRVEDASPWNHSILALAAVVVIISMVLLGRSIQASRKEKMQPPEKETPEVLHLDEAKDHNSLNNLRETLLSEKPNLAQVELELKERDVLSVFLPDVPETES
2JO1 Chain:A ((18-37))
-------------------------------------IGGLVIAGILFILGILIVLSRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JO1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6443 for 77 contacts (-83.7/contact) +
2D Compatibility (PS) -2219 + (NN) -2553 + (LL) 4160
1D Compatibility (HY) -4000 + (ID) 150
Total energy: -11205.0 ( -145.52 by residue)
QMean score : -0.058
(partial model without unconserved sides chains):
PDB file :
Tito_2JO1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JO1-query.scw
PDB file :
Tito_Scwrl_2JO1.pdb
: