Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKRLLTVAAFALAGCVTVVAQDKKKEFKMPTGYAGITHEMSEFYEPVPPVVTPGTDLKGGGFTAPSDAIVLFDGKDLSAWESVKGGA---AEWDVHDGVFTVNKKKG-------DIQTKQKFNDFQMHIEWQVPTN--------ITGESQSRGNS-GIFLQGMYEVQVLDCYNNPTYVNGQT-GSIYKQSIPLANAMRKPGEWNVYDIIYTAPTFKEDGSYRTHPTVTVIQNGVVLQNHTTILGTTEWIGFPQVKKHGA------GPIILQSHGDPSEPISFRNIWIREL |
3HBK Chain:A ((32-244)) | ----------------------------------------------------------------------LLFDGKTTKGWRGAHKDAFPDHGWMVKDGELIVQKSDGSESTNGGDIVTEGEYSAFEFSVDFKITEGANSGIKYFVTEQEKQKGSAYGLEFQLLDDAKHPDAKLYTTFPGSRTLGSLYDLKKSENIHFNGVGEWNTA----VVKVFPNNHVEHWLNGVKVLEYERGSKEFRDLVKGSKYAD-PSYNAGGAFGEAPKGHILLQDHGDE---VAFRNIKVKEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35927 for 1337 contacts (-26.9/contact) +
2D Compatibility (PS) -19442 + (NN) -20 + (LL) 4512
1D Compatibility (HY) -7600 + (ID) 2550
Total energy: -61027.0 ( -45.64 by residue)
QMean score : 0.223
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