Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGHHHHHHSHMQQAISEKDRGNGFFKEGKYERAIECYTRGIA------------ADGANALLPA---NRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTARTFLGKLNEAKQDFETVLLLEPGNKQAVTELSKIKK
1P5Q Chain:A ((144-271))
----------LEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLA----
General information:
TITO was launched using:
RESULT:
Template:
1P5Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11524 for 816 contacts (14.1/contact) +
2D Compatibility (PS) -12442 + (NN) -5712 + (LL) 712
1D Compatibility (HY) -5600 + (ID) 2250
Total energy: -13768.0 ( -16.87 by residue)
QMean score : 0.238
(partial model without unconserved sides chains):
PDB file :
Tito_1P5Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P5Q-query.scw
PDB file :
Tito_Scwrl_1P5Q.pdb
: