Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MDTQQLY-FLNDIG---KQKPESIRNRSAAC---PFCDRENLTDILATEGS---------IIWLKNKFPTLKDTFQTVLIETDNCED-------HIATYTEEHMRSLIRF----------SIKHWLNLQKNEEFTSVILYKNHGPFSGGSLHHAHMQIIGMKYVNYLDNVE-----QDNFQGVIVQKNEHIELNISDRPIIGFT-----EFNIIIEDIGCIDELANYI-------QQTVRYILTDFHKGCSSYNLFF---YYLNEKIICKVV-------------PRFVVSP----LYVGYK-IPQVSTKIEDVK-IQLAAYFTKQNDAIIHKKIE--------------- |
| 4B3X Chain:A ((1-363)) | MAKVRIYQLAKELGMETQELLELLDQMGVAYKSHASTLEEKDAEAVRELVKEQRGLQEKLAEEERRKSLPRRPPVVVIMGHVDHGKTTLLDYLRKSRIAEKEGGGITQHVGAFEVKTPQGTVVFIDTPGHEAFTTIRQ--RGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINKIDLPQADPEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMILLLAELEDYRADPNAEPRGVILESKLDKQAGIIANMLVQEGTFRVGDYVVAGEAYGRIRAMMDADGNQRKEAGPGSAVQVLGFQELPHAGDVVEWVPDLEAAKEIAEERKEERKAREEEEKARRPRTMAELLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B3X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55578 for 1737 contacts (-32.0/contact) +
2D Compatibility (PS) -27800 + (NN) -1446 + (LL) 332
1D Compatibility (HY) -8000 + (ID) 2200
Total energy: -94692.0 ( -54.51 by residue)
QMean score : 0.212
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