Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceAENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNS-TTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
4LSS Chain:G ((83-359))------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAITQACPKVTFEPIPIHYCAPAGFAILKCKDEEFNGTGLCKNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIRIKSENISDNAKTIIVQLTKPVLINCARPS-------G---------------DIRQAYCVVNRTQWNDTLGQVAIQLRKHW--NTTIIFNEPSGGDLEITTHSFNCGGEFFYCNTSDLFNSTW--------------NDNITLPCRIKQIINMWQRVGQAMYAPPIQGVIRCQSNITGILLTRDGGNT--RTNETFRPGGGDMRDNWRSELYKYKVVKIE---------------------


General information:
TITO was launched using:
RESULT:

Template: 4LSS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105005 for 1833 contacts (-57.3/contact) +
2D Compatibility (PS) -27564 + (NN) -12681 + (LL) 12652
1D Compatibility (HY) -31600 + (ID) 10300
Total energy: -174498.0 ( -95.20 by residue)
QMean score : 0.238

(partial model without unconserved sides chains):
PDB file : Tito_4LSS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LSS-query.scw
PDB file : Tito_Scwrl_4LSS.pdb: