Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | QDTFIAAVYEHAAILPNATLTPVSREEALALMNRNLDILEGAITSAADQGAHIIVTPEDA----------------------------IYGWNFNRDSLYPYLEDIPDPEVNWI----------PCNNRNRFGQTPVQERLSCLAKNNSIYVVANIGDKKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHKQNLFMGENQFNVPKEPEIVTFNTTFGSFGIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMNVLPHLSAVEFHSAWAMGMRVNFLASNIHYPSKKMTGSGIYAPNSSRAFHYDMKTEEGKLLLSQLDSHPSHSAVVNWTSYASSIEALSSGNKEFKGTVFFDEFTFVKLTGVAGNYTVCQKDLCCHLSYKMSENIPNEVYALGAFDGLHTVEGRYYLQICTLLKCKTTNLNTCGDSAETASTRFEMFSLSGTFGTQYVFPEVLLSENQLAPGEFQVSTDGRLFSLKPTSGPVLTVTLFGRLYEKDWASNASSG- |
| 2VHH Chain:A ((6-386)) | LKNLNDCLEKH---LPPDELKEVKRILYGVEEDQTLELPTSAKDIAEQNGFDIKGYRFTAREEQTRKRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTMPFAFEFAEEAENGPTTKMLAELAKAYNMVIIHSILERDM---------EHGETIWNTAVVISNSGRYLGKHRKNHIP------RMEGNTGHPVFETEFGKLAVNICYGRHHPQNWMMFGLN-GAEIVFNPSATIGRLS-------EPLWSIEARNAAIANSY--------------------------------------------------------------------------------------------------------------------------------FTVPINRVGTEQFPFYGSSY-VAAPDGSRTPSLSRDKDGLLVVELDLNLCRQVKDFW---------GFRMTQRVPLYAESFKKASEHGFKPQIIKET |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91247 for 2354 contacts (-38.8/contact) +
2D Compatibility (PS) -32761 + (NN) -5921 + (LL) 9028
1D Compatibility (HY) -4800 + (ID) 2350
Total energy: -128051.0 ( -54.40 by residue)
QMean score : 0.163
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