Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIKKLFSIFTLVILVFATACTNKSEKATVSDTNEKPKEEIKIVEPNGAEKTKLNLNFGVGKLNISGNEEKLMKGKFIYSEN-EWKPEIKYEVKDKDGELEISQPGLKSGNVSLNNKRNEWNINLNEKIPTEIKLSLGTGEFKADLSKINLKELNVGM----GVGKVDLDIS---GNYKNN--VKVNIEGGVGEATVYLPK----------------SIGVKIK-AEKGVGAVNANGFIVEGENIYKNSQ--------------YGKSKNSIEVNIEAGVGAINIKQK----- |
| 2YN5 Chain:A ((1-283)) | TPPNAPVVTYSDIVNDLIIMQGTAEAKSQLIITDSEGNTYTLTVPDNGKWSMAIPYPSE-GKFTITSVDAIGNRSDDVPLDIMKEVPVISLSPDSDSG---------TVGDNITRDKQPTFIIGNLESDVVVVQVDINGTVYNAEKNADGVWFFTPGTPLADGSYTISVIASDAAGNQKNSLPITVTIDSTLTVPEIALAAGEDNGASDSDNVTNHTQPKFTLQHIDADVTGVTVNVTHNGVTDIYQATQGADGWTFTPPAAWNDGNYTLSVTVVDRAGNSQQSASLAVTVDS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 83367 for 1644 contacts (50.7/contact) +
2D Compatibility (PS) -24370 + (NN) 10553 + (LL) 736
1D Compatibility (HY) 0 + (ID) 1850
Total energy: 68436.0 ( 41.63 by residue)
QMean score : 0.123
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