Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLNLSVDEVLTTTRSVRKRLD-----FDKPVPRDVLMECLELALQAPTGSNSQGWQWVFV-EDAAKKKAIADVYLANARGYLSGPAPEYPDGDTRGERMGRVRDSATYLAEHMHRAPV-LLIPCLKGREDESAVGGVSF----WASLFPAVWSFCLALRSRGLGSCWTTLHLLDNGEHKVADVLGIPYDEYSQGGLLPIAYTQGIDFRPA-------KRLPAESVTHWNGW
2ISK Chain:A ((18-227))
----FSSDERAAVYRAIETRRDVRDEFLPEPLSEELIARLLGAAHQAPSVGFMQPWNFVLVRQDETREKVWQAFQRAN------DEAAEM----FSGERQAKYR---SLKLEGIRKAPLSICVTCDRTRGGAVVLGRTHNPQMDLYSTVCAVQNLWLAARAEGVGVGWVSIF----HESEIKAILGIP-DHVEIVAWLCLGFVDRLYQEPELAAKGWRQRLPLEDLVFEEGW
General information:
TITO was launched using:
RESULT:
Template:
2ISK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94838 for 1274 contacts (-74.4/contact) +
2D Compatibility (PS) -20735 + (NN) -10850 + (LL) 532
1D Compatibility (HY) -10800 + (ID) 2750
Total energy: -139441.0 ( -109.45 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_2ISK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ISK-query.scw
PDB file :
Tito_Scwrl_2ISK.pdb
: