Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------AARYDDVLYFPASRYPETGAHISDAIKAGH-ADVCTIERSGADKRRQ---ESLKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLNGYADGTRILFIVQ------------------------------------------------------------------ |
| 2PNN Chain:A ((11-258)) | LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYY-----KGQTALHI--AIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSV-----GNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PNN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11654 for 695 contacts (16.8/contact) +
2D Compatibility (PS) -10469 + (NN) -3328 + (LL) 12
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -7331.0 ( -10.55 by residue)
QMean score : 0.135
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