Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------------------------------------------------MSEAALTPAFEEPEA-PRASPRSRSTLLKRLADVV--CLPSSRINAFERSMTADLLVEMLRDANVGER-EKVARRLAMLNEMPGVLVRLLLRDELP--------VARALLVDSEKLSDADLISCLYQATTEHRRLIAQRRGVSEVVADALIEVGEPAVIETLLRNELVKLSHQGVENIVAAT----RDAQHLIPLLLRRAELRPSHAYVMFWWADSEARRVILQRFAVSREILQDAVGDVFA--LASAEGWQDPLSRKALQFIERRQRNRAAIAKSPFNSLDEAVAAGEGGFNREIAEEISYLSGL-KPMTGAKIFTDPGGEPLAILCKATGLPRGCVRQLWRGLRRQE--VDRTGATDPNLERVLTVYDAIAVDRAQTVLRYWNWSLTSALTPALLKAIRDGDEAAVD----EYSAPQRAAMLALSRDFGR------------------------------------------------------------------------------ |
3O4Z Chain:A ((1-688)) | MVLETLKQGLDSSQIHEALIQLDSYPREPVDLDASMVLIKFVIPVYPSLPERSKVILRRLASKSFTFLCQIVTFSRTIGLQEIRIYQEILEDIISFEPGCLTFYLKASTTSKADRDSIKALFFGSKLFNVLANRIDMAKYLGYLRLQWKFLLESNETDPPGFLGEWLVSSFLLNPVLAADMLLGELFLLKESYFFSFQKIISASSLIDQKRLIAKFLLPYIQVIVTLENLNDVRKILRRFDLDKIISLSVLFEIQSLPLKEVIVRLMSNHSSTKFVSALVSKFADFTDEEVDTKTCELLVLFAVHNLNHSQREEIAHDERFLNGVTKHLGSNEREARERAMFIAKLLSGGHLKYESDFKINIPNVKSDDKIIDFQSLKREIVKRIVFLKDLMKEYEKSRKAPLIPLLKQTVKLIRQKAFQLEVGYYAQGILSSIVCLNNEFDEPLFEQWRINALTSILVVLPEKVNGAINILFNSELSLQQRMSLLSALGLSARELRGLDTQNRFRKYAGLFFYPLAHGWLNGIQLFKSHYLTTLRIIYSCANPVHDFESMTELMNHIISSAIEEGISLNKG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50601 for 2988 contacts (-16.9/contact) +
2D Compatibility (PS) -43417 + (NN) -11334 + (LL) 0
1D Compatibility (HY) -6400 + (ID) 2100
Total energy: -113852.0 ( -38.10 by residue)
QMean score : 0.260
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