Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHHHHHHMVAMQSTIPSLTREEIADRMQHNPLVQAYQQEVMHWCKIVYGNSDVLKEKMQEVLQKPSEGEDLSRQVAENPTSVHKLAGRNLCGLKTNARRQAEEGFMHLCQALDGYTSAVTQAQENIKHVPQAEARRYGQESEQRA
1FWY Chain:A ((3-90))
-------------------------------------------------------NNAMSVVILAAGKG---TRMYSDLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQQAA
General information:
TITO was launched using:
RESULT:
Template:
1FWY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 30480 for 586 contacts (52.0/contact) +
2D Compatibility (PS) -8842 + (NN) 1541 + (LL) 5100
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: 24429.0 ( 41.69 by residue)
QMean score : -0.042
(partial model without unconserved sides chains):
PDB file :
Tito_1FWY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FWY-query.scw
PDB file :
Tito_Scwrl_1FWY.pdb
: