Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFQKKTYAVFLILLLMMFTAACSGSKTSAEKKESETEKSSDIAQVKIKDVSYTLPSKYDKSTSDDQLVLKVN---VAVKNTGKDPLNVD----SMDFTLYQGDTKMSDTDPEDYSEKLQGSTINADKSVEGNLFFVVDKGKQYELNYTPESYGDKKPKSVTFKIDGKDKKILATADKLQDSAKALS--AYVDVLLFGKDNADFEKITGANKNEIVNDF---------NESAKDGYLSASGL----SSTYADSKALDNIVNGIKEGLSKNSSIQAKTTSISKDEAIVEATVKPVDASSLSDRIEDKVKDYYSKNSSASYEEAVKYALQVYPEEFKKLGPASSEKTVEVKMKKNDIDQWQLDMDDYRAAELVEAFIKE |
| 2XMO Chain:A ((33-337)) | ----------------------------------PIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGD--LTNNGEKTSHEELAKKLTQVEKN--GTQVFVV-----------PGNHDINNPWARKFE---KDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDV--KGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSVFPHKYGNITYSAKNKNFTYQSQKLDMEAW------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 121734 for 2333 contacts (52.2/contact) +
2D Compatibility (PS) -29106 + (NN) 2208 + (LL) 6412
1D Compatibility (HY) -7600 + (ID) 2900
Total energy: 90748.0 ( 38.90 by residue)
QMean score : 0.050
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