Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-GHMGSPVSYYFSYADGGTSHTEYPDDSSAGSFILDITSYKKTGNSTKALSWNASGDSWIHVNGSSVSYDENPAKERRTGLVTLKQDESG--KTLSLKIVQPGKTSID
2KK4 Chain:A ((1-95))
QGHMDLICMYVFKGEESFGESIDVYGD-------YLIVKVGTEFLAVPKKSIKSVEDGRIVIG----EFDEEEARELGRKWLEEKSKPVTLEELKSYGFGEEGEGS--
General information:
TITO was launched using:
RESULT:
Template:
2KK4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 23169 for 592 contacts (39.1/contact) +
2D Compatibility (PS) -10359 + (NN) -8002 + (LL) 316
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -176.0 ( -0.30 by residue)
QMean score : 0.166
(partial model without unconserved sides chains):
PDB file :
Tito_2KK4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KK4-query.scw
PDB file :
Tito_Scwrl_2KK4.pdb
: